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Bioconductor Review

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Excellent

Revainrating 5 out of 5  
Rating 
5.0
Vertical Industry, Laboratory

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Description of Bioconductor

The Bioconductor mission is to promote the statistical analysis and comprehension of current and emerging high-throughput biological assays. Bioconductor is based on packages written primarily in the R programming language. Bioconductor is committed to open source, collaborative, distributed software development and literate, reproducible research. Enabling user and developer communities is an essential part of our mission. Scientific and Technical Advisory Boards provide project oversight.

Reviews

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Type of review

I like that it has many functions for different types of experiments done in genomics/transcriptomic data sets such as gene expression arrays or next generation sequencing (RNA seq). It can handle very large matrices with thousands upon thousands of variables and hundreds of samples. You can even download other people's code into your own workspace without having access to their original folder structure by setting up custom environment file paths. Can be tricky when trying to figure out what…

Pros
  • Extensive documentation
  • Large community sharing resources.
  • Worksheets available directly within RStudio, no extra software needed saves time instead downloading separate applications just because one uses them frequently enough
Cons
  • Some cons